Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015851354.1_cds_XP_016511470.1_24205
CDS Infomation

[gene=LOC107828633] [db_xref=GeneID:107828633] [protein=E3 ubiquitin protein ligase DRIP1-like] [protein_id=XP_016511470.1] [location=complement(join(11072..11251,11335..11407,11704..11754,11854..12377,13081..13462,14414..14513,14979..15084))] [gbkey=CDS]
Sequence

ATGGATTTTGCTACACGGCAAGCAAGTATTAAGAGTGTTTTGACATGCGGAATTTGCAAA
AAGCTATGCAAAAAAGTCACCATAATTGAAGAATGCTGTCACAGATTTTGCAAGAAGTGC
ATAACAAAGAAGATAACAGAAGAGAAATCGCATAGTTGTCCAGTATGCAACTTGGATTTA
GGCTGTGCCCCATTGCAGAAAATCAGGCCTGATAACCAAGTCCAAGAGATTCGCGACATA
TTTTCTAATCGAAGAAAAGAATACATTGAGCGTGGAATAATTGAAGGAAACTCCAAAAAA
GGCGAAAGCAAAAAGGTAGCTGAGGATAATAATGCCATGCTCATTGATAATCCATTGCCT
GCTACTAGTTCAAGGAGAAAGGAGAAGTCCATCTCTTCCTTAGTGACTACTAAACCTGAA
GTTTCAAATCATCAGAACGTTCCGAGTGGAAGAAAAAAAGGCCATGCTCCTCGTTTTCAA
GATCCCATTAAATTTGATCTTAATGTTGAGCACAAGTTAAAGGGAGATCAGTCTGGAAGT
TCAAATACTCCTCTTCTTTCAAGCAAAGCTACTCAGAATAAAGAACAGGTGGAGAGTCCT
AATGCTGCTGAGTCCTCAAAGAATGATGTCTCAAAGAATCCTACTCCAAGAAAAGGTGAA
CCACTGGATGGTATGAATGACCTATGGGAACCACTAAATACATTGGTAATTAAAGGTGTG
AGTTTAGGCAATTCCAACAAATCCAAGTCCACAGAGCCTGTCTCAAACTTCGCTCCGATA
GTCAATCTTGAAGATGAAGATGAAGACGATGAAGAAGATGACGAAGAAGATGAGGAGTAC
GTCCCTTCTAAAACAAAGGAACACAAAGTTAGCAAACCAAATGTTCAAAAAGAGGAAAAT
AGATCAAGTAATATTGCAGCTGCAGCACCATCAAGTACTTCAGGAAAAGGCAAAAAGGGA
CGCCGTGGCAGAAAGAAAAAGGACACACTTCCCTCTGGTGGCGGATCAAGTAATGCGCCA
GAAGTACGAGTTACTAATGAGGCCACAAGCAGCAGTAAAAAGAATGAAAGAACCAGTCCT
ATTTGGTTTACTTTAGTTGCATCTGATAAACAGGAAGGTCATTCACCCTTGCCACAGATT
CCTTCCCGCTACATAAAGATCAAGGATGTGAATATGCCTGCTTTGTACATAAAGAAGTAT
CTTGCACAAAAACTGAGTCTCCAGAGTGAAGACGAGGTGGAGATTCGCATATTAGGCCTT
CCGATTCTTCCTGCATTGCCACTGTACCGACTAGTTGAGCTGTGGTTACGTGCAGCACCA
AGCTCAGAAATTAGAAAGGCAAAAGTGGGAGGTTCTGCCAAAGATTTCGTGATGGTTTTG
ACATATGCTCGCAACCTTAGACCTCAACCTCATTGA

Peptide Sequence

PEP ID

XP_016511470.1
PEP Infomation

PREDICTED: E3 ubiquitin protein ligase DRIP1-like [Nicotiana tabacum]
Sequence

MDFATRQASIKSVLTCGICKKLCKKVTIIEECCHRFCKKCITKKITEEKSHSCPVCNLDL
GCAPLQKIRPDNQVQEIRDIFSNRRKEYIERGIIEGNSKKGESKKVAEDNNAMLIDNPLP
ATSSRRKEKSISSLVTTKPEVSNHQNVPSGRKKGHAPRFQDPIKFDLNVEHKLKGDQSGS
SNTPLLSSKATQNKEQVESPNAAESSKNDVSKNPTPRKGEPLDGMNDLWEPLNTLVIKGV
SLGNSNKSKSTEPVSNFAPIVNLEDEDEDDEEDDEEDEEYVPSKTKEHKVSKPNVQKEEN
RSSNIAAAAPSSTSGKGKKGRRGRKKKDTLPSGGGSSNAPEVRVTNEATSSSKKNERTSP
IWFTLVASDKQEGHSPLPQIPSRYIKIKDVNMPALYIKKYLAQKLSLQSEDEVEIRILGL
PILPALPLYRLVELWLRAAPSSEIRKAKVGGSAKDFVMVLTYARNLRPQPH

Transcript Sequence

Gene sequence data has not been registered.